Semi-automated assessment of the risk of bias due to missing evidence in network meta-analysis: a guidance paper for the ROB-MEN web-application. Virginia Chiocchia, Alexander Holloway, and Georgia Salanti. BMC Medical Research Methodology, 23(1):1--11, 2023. [ .pdf ]
The Impact of the COVID-19 Pandemic and Associated Control Measures on the Mental Health of the General Population: A Systematic Review and Dose-Response Meta-analysis. Georgia Salanti, Natalie Peter, Thomy Tonia, Alexander Holloway, Ian R White, Leila Darwish, Nicola Low, Matthias Egger, Andreas D Haas, Seena Fazel, ..., and Stefan Leucht. Annals of Internal Medicine, 2022. [ .pdf ]
A living meta-ecological study of the consequences of the COVID-19 pandemic on mental health, Stefan Leucht, Andrea Cipriani, Toshi A Furukawa, Natalie Peter, Thomy Tonia, Theodoros Papakonstantinou, Alexander Holloway, and Georgia Salanti. 2021. [ .pdf ]
Probabilistic inference of the genetic architecture underlying functional enrichment of complex traits. Marion Patxot, Daniel Trejo Banos, Athanasios Kousathanas, Etienne J Orliac, Sven E Ojavee, Gerhard Moser, Alexander Holloway, Julia Sidorenko, Zoltan Kutalik, Reedik Mägi, ..., and Matthew R. Robinson. Nature communications, 12(1):1--16, 2021. [ .pdf ]
An efficient way to assess the effect of COVID-19 on mental health in the general population. Georgia Salanti, Andrea Cipriani, Toshi A Furukawa, Natalie Peter, Thomy Tonia, Theodoros Papakonstantinou, Alexander Holloway, and Stefan Leucht. The Lancet Psychiatry, 8(5):e14--e15, 2021. [ .pdf ]
The genetic architecture of gene expression in peripheral blood. Luke R Lloyd-Jones, Alexander Holloway, Allan McRae, Jian Yang, Kerrin Small, Biao Zeng, Andrew Bakshi, Andres Metspalu, Manolis Dermitzakis, Greg Gibson, ..., and Joseph E Powell. The American Journal of Human Genetics, 2017. [ .pdf ]
Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood. Samuel W Lukowski, Luke R Lloyd-Jones, Alexander Holloway, Kirsten Holger, Gibran Hemani, Jian Yang, Kerrin Small, Jing Zhao, Andres Metspalu, ..., and Joseph E Powell. Nature Communications, 2017. [ .pdf ]
Constraints on eQTL fine mapping in the presence of multi-site local regulation of gene expression. Biao Zeng, Luke R Lloyd-Jones, Alexander Holloway, Urko M Marigorta, Andres Metspalu, Grant W Montgomery, Tonu Esko, Kenneth L Brigham, Arshed A Quyyumi, Youssef Idaghdour, ..., and Greg Gibson. G3: Genes, Genomes, Genetics, 2017. [ .pdf ]
Autosomal genetic control of human gene expression does not differ across the sexes. Irfahan Kassam, Luke Lloyd-Jones, Alexander Holloway, Kerrin S Small, Biao Zeng, Andrew Bakshi, Andres Metspalu, Greg Gibson, Tim D Spector, Tonu Esko, ..., and Allan F McRae. Genome Biology, 17(1):248, 2016. [ .pdf ]
Evidence for mitochondrial genetic control of autosomal gene expression. Irfahan Kassam, Tuan Qi, Luke Lloyd-Jones, Alexander Holloway, Marc Jan Bonder, Anjali K Henders, Nicholas G Martin, Joseph E Powell, Lude Franke, Grant W Montgomery, et al. Human molecular genetics, 25(24):5332--5338, 2016. [ .pdf ]
Trans-eQTLs identified in whole blood have limited influence on complex disease biology. Chloe X Yap, Luke Lloyd-Jones, Alexander Holloway, Peter Smartt, Naomi R Wray, Jacob Gratten, and Joseph E Powell. European Journal of Human Genetics, 26(9):1361--1368, 2018. [ .pdf ]
Identify disorders in health records using conditional random fields and Metamap: AEHRC at ShARe/CLEF 2013 eHealth Evaluation Lab Task 1. Guido Zuccon, Alexander Holloway, Bevan Koopman, and Anthony Nguyen. In Proceedings of the CLEF 2013 Workshop on Cross-Language Evaluation of Methods, Applications, and Resources for eHealth Document Analysis, pages 1--8. The CLEF Initiative (Conference and Labs of the Evaluation Forum), 2013. [ .pdf ]
Read classification for next generation sequencing. James Hogan, Peter Holland, Alexander Holloway, Robert Petit III, and Timothy Read. In Proceedings of ESANN 2013: European Symposium on Artificial Neural Networks, 2013. [ .pdf ]